Epimerization and Decomposition of Kojibiose and Sophorose by Heat Treatment under Neutral pH Conditions

We evaluated the stabilities of kojibiose and sophorose when heated under neutral pH conditions. Kojibiose and sophorose epimerized at the C-2 position of glucose on the reducing end, resulting in the production of 2-O-α-D-glucopyranosyl-D-mannose and 2-O-β-D-glucopyranosyl-D-mannose, respectively. Under weak alkaline conditions, kojibiose was decomposed due to heating into its mono-dehydrated derivatives, including 3-deoxy-2,3-unsaturated compounds and bicyclic 3,6-anhydro compounds. Following these experiments, we propose a kinetic model for the epimerization and decomposition of kojibiose and sophorose by heat treatment under neutral pH and alkaline conditions. The proposed model shows a good fit with the experimental data collected in this study. The rate constants of a reversible epimerization of kojibiose at pH 7.5 and 90 °C were (1.6 ± 0.1) × 10⁻⁵ s⁻¹ and (3.2 ± 0.2) × 10⁻⁵ s⁻¹ for the forward and reverse reactions, respectively, and were almost identical to those [(1.5 ± 0.1) × 10⁻⁵ s⁻¹ and (3.5 ± 0.4) × 10⁻⁵ s⁻¹] of sophorose. The rate constant of the decomposition reaction for kojibiose was (4.7 ± 1.1) × 10⁻⁷ s⁻¹ whereas that for sophorose [(3.7 ± 0.2) × 10⁻⁶ s⁻¹] was about ten times higher. The epimerization reaction was not significantly affected by the variation in the buffer except for a borate buffer, and depended instead upon the pH value (concentration of hydroxide ions), indicating that epimerization occurred as a function of the hydroxide ion. These instabilities are an extension of the neutral pH conditions for keto-enol tautomerization that are often observed under strong alkaline conditions.     

Relational analysis model of weather conditions and sales patterns based on nonnegative tensor factorization

It is necessary to analyze the relationships between the retail sales of various items and weather conditions. However, the relationship between the sales of each item and the weather condition may vary among stores. Additionally, it is necessary to model the statistical relationships between a wide variety of goods and weather conditions by using past sales data. In such a case, it becomes unrealistic to construct a forecast model for every individual item owing to the breadth of items and the number of retail shops. This study proposes a model to analyze the relationships between the sales of various items and weather conditions. This method can be used to decompose the data into three matrices based on the nonnegative tensor factorization (NTF) method. The results of the analysis clarified that the proposed model can identify important items whose demand is strongly influenced by weather conditions, thereby increasing the effectiveness of inventory management. Additionally, the store clusters estimated by the proposed model can facilitate the construction of regression models that demonstrate the relationship between the sales of each item and weather conditions.     

Tryptophanase-Catalyzed l-Tryptophan Synthesis from d-Serine in the Presence of Diammonium Hydrogen Phosphate

Tryptophanase, an enzyme with extreme absolute stereospecificity for optically active stereoisomers, catalyzes the synthesis of l-tryptophan from l-serine and indole through a β-substitution mechanism of the ping-pong type, and has no activity on d-serine. We previously reported that tryptophanase changed its stereospecificity to degrade d-tryptophan in highly concentrated diammonium hydrogen phosphate, (NH₄)₂HPO₄ solution. The present study provided the same stereospecific change seen in the d-tryptophan degradation reaction also occurs in tryptophan synthesis from d-serine. Tryptophanase became active to d-serine to synthesize l-tryptophan in the presence of diammonium hydrogen phosphate. This reaction has never been reported before. d-serine seems to undergo β-replacement via an enzyme-bonded α-aminoacylate intermediate to yield l-tryptophan.     

Synthesis of Cycloparaphenylenes and Related Carbon Nanorings: A Step toward the Controlled Synthesis of Carbon Nanotubes

Since their discovery in 1991, carbon nanotubes (CNTs) have attracted significant attention because of their remarkable mechanical, electronic, and optical properties. Structural uniformity of the CNT is critically important because the sidewall structures (armchair, zigzag, and chiral) determine many of the significant properties of CNTs. Ideally researchers would synthesize CNTs with a defined target sidewall structure and diameter, but the current synthetic methods, such as arc discharge and chemical vapor deposition, only provide CNTs as the mixtures of various structures. Purification of these mixtures does not allow researchers to isolate a structurally uniform CNT, which is the bottleneck for fundamental studies and advanced applications of these materials. Therefore, the selective and predictable synthesis of structurally uniform CNTs would represent a critical advance in both nanocarbon science and synthetic chemistry. This Account highlights our efforts toward the bottom-up synthesis of structurally uniform carbon nanotubes (CNTs). We envisioned a bottom-up synthesis of structurally uniform CNTs through a controlled growth process from a short carbon nanoring (template) that corresponds to the target structure of CNTs. Our simple retrosynthetic analysis led to the identification of cycloparaphenylenes (CPPs), acene-inserted CPPs, and cyclacenes as the shortest sidewall segments of armchair, chiral, and zigzag CNTs, respectively. With this overall picture in mind, we initiated our synthetic studies of aromatic rings/belts as an initial step toward structurally uniform CNTs in 2005. This research has led to (i) a general strategy for the synthesis of CPPs and related carbon nanorings using cyclohexane derivatives as a benzene-convertible L-shaped unit, (ii) a modular, size-selective, and scalable synthesis of [n]CPPs (a shortest segment of armchair CNTs), (iii) the X-ray crystal structure analysis of CPPs, (iv) the design and synthesis of acene-inserted CPPs as the shortest segment of chiral CNTs, and (v) the first synthesis of cyclo-1,4-naphthylene, a π-extended CPP. We believe this work will serve as important initial steps toward a controlled synthesis of CNTs.     

Adhesion of ultrahigh molecular weight polyethylene plates photografted with hydrophilic monomers and evaluation of failure location by X‐ray photoelectron spectroscopy

In this study, methacrylic acid (MAA) and acrylic acid (AA) were photografted onto the ultrahigh molecular weight polyethylene (UHMWPE) plates at different monomer concentrations and temperatures, and the grafted UHMWPE plates were bonded with aqueous polyvinyl alcohol (PVA) solutions. The tensile shear adhesive strength of both grafted UHMWPE plates was also discussed in relation to wettability and water absorptivity. The location of failure was also estimated by X‐ray photoelectron spectroscopy (XPS). Wettability of the MAA‐grafted UHMWPE plates became constant, when the UHMWPE surface was fully covered with grafted PMAA chains. Conversely, wettability of the AA‐grafted UHMWPE plates passed through the maximum value and then gradually decreased against the grafted amount probably due to aggregation of grafted PAA chains. Water absorptivity of the grafted layers formed at lower monomer concentrations or temperatures sharply increased at lower grafted amounts. The adhesive strength increased with the grafted amount and substrate breaking was observed at higher grafted amounts, indicating that a main factor to increase the adhesive strength is the formation of a grafted layer by shorter grafted polymer chains and/or the restriction of the location of photografting to the outer surface region. In addition, surface analysis by XPS showed that failure occurred in the boundary between the layer composed of grafted polymer chains and PVA chains and the ungrafted layer at a low adhesive strength, and the location of failure was shifted to the grafted layer containing PVA chains at the grafted amount increased. © 2013 Wiley Periodicals, Inc. J. Appl. Polym. Sci. 2014 , 131, 40133.     

Nitrogen fixation in Rhodopseudomonas palustris co-cultured with Bacillus subtilis in the presence of air

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The essential function of Rrs1 in ribosome biogenesis is conserved in budding and fission yeasts

The Rrs1 protein plays an essential role in the biogenesis of 60S ribosomal subunits in budding yeast (Saccharomyces cerevisiae). Here, we examined whether the fission yeast (Schizosaccharomyces pombe) homologue of Rrs1 also plays a role in ribosome biogenesis. To this end, we constructed two temperature‐sensitive fission yeast strains, rrs1‐D14/22G and rrs1‐L51P, which had amino acid substitutions corresponding to those of the previously characterized budding yeast rrs1‐84 (D22/30G) and rrs1‐124 (L61P) strains, respectively. The fission yeast mutants exhibited severe defects in growth and 60S ribosomal subunit biogenesis at high temperatures. In addition, expression of the Rrs1 protein of fission yeast suppressed the growth defects of the budding yeast rrs1 mutants at high temperatures. Yeast two‐hybrid analyses revealed that the interactions of Rrs1 with the Rfp2 and Ebp2 proteins were conserved in budding and fission yeasts. These results suggest that the essential function of Rrs1 in ribosome biogenesis may be conserved in budding and fission yeasts. Copyright © 2015 John Wiley & Sons, Ltd.     

Morphological and functional behaviors of rat hepatocytes cultured on single-walled carbon nanotubes

This study describes the morphological and functional behaviors of rat hepatocytes on single-walled carbon nanotube (CNT)-coated surfaces. Although the hydrophobic characteristics of CNT-coated surfaces increased with increasing CNT density, hepatocyte adhesion decreased, indicating that the interaction between hepatocytes and CNTs is weak. We found that hepatocytes on a CNT-coated surface gradually gather together and form spheroids (spherical multicellular aggregates). These spheroids exhibit compact spherical morphology with a smooth surface and express connexin-32, an intracellular communication molecule. In contrast, collagen treatment in conjunction with the CNT-coated surface improved hepatocyte adhesion, and the cells maintained a monolayer configuration throughout the culture period. The albumin secretion and ammonia removal activities of hepatocyte spheroids were maintained at elevated levels for at least 15 days of culturing as compared with hepatocyte monolayers. These results indicate that CNTs can be used for the formation and long-term culture of hepatocyte spheroids.     

Multiscale simulation of aluminum thin films for the design of highly-reliable MEMS devices

A multiscale simulation methodology is presented to predict the macroscopic mechanical properties of aluminum thin films with a columnar grain structure from the morphology at microscopic scale. The elasto–plastic characteristics of the thin films are calculated as a function of the grain size, temperature, and strain rate by taking into account creep phenomena. The simulated data are validated by experimental stress–strain curves measured by dedicated microstructures in conjunction with a nanoindentation test equipment.